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Full Record: BioGRID  
Short NameBioGRID
Full NameBiological General Repository for Interaction Datasets
URLhttp://www.thebiogrid.org/
Last ObservedFebruary 2nd, 2017
DescriptionThe Biological General Repository for Interaction Datasets (BioGRID) database was developed to house and distribute collections of protein and genetic interactions from major model organism species, as derived from both high-throughput studies and conventional focused studies.

Through comprehensive curation efforts, BioGRID now includes a virtually complete set of interactions reported to date in the primary literature for both the budding yeast Saccharomyces cerevisiae and the fission yeast Schizosaccharomyces pombe.

Sample Data URL 
Data SourcePrimary
AvailabilityFree to all users
PubMed ArticlesThe GRID: the General Repository for Interaction Datasets
Breitkreutz BJ, Stark C, Tyers M.
Genome Biol. 2003;4(3):R23


BioGRID: a general repository for interaction datasets
Stark C, Breitkreutz BJ, Reguly T, Boucher L, Breitkreutz A, Tyers M.
Nucleic Acids Res. 2006 Jan 1;34(Database issue):D535-9


The BioGRID Interaction Database: 2008 update
Breitkreutz BJ, Stark C, Reguly T, Boucher L, Breitkreutz A, Livstone M, Oughtred R, Lackner DH, Bähler J, Wood V, Dolinski K, Tyers M.
Nucleic Acids Res. 2008 Jan;36(Database issue):D637-40


The BioGRID Interaction Database: 2011 update.
Stark C, Breitkreutz BJ, Chatr-Aryamontri A, Boucher L, Oughtred R, Livstone MS, Nixon J, Van Auken K, Wang X, Shi X, Reguly T, Rust JM, Winter A, Dolinski K, Tyers M
Nucleic Acids Res. 2011 Jan;39(Database issue):D698-704.


BioGRID REST Service, BiogridPlugin2 and BioGRID WebGraph: new tools for access to interaction data at BioGRID.
Winter AG, Wildenhain J, Tyers M
Bioinformatics. 2011 Apr 1;27(7):1043-4.


The BioGRID interaction database: 2013 update.
Chatr-Aryamontri A, Breitkreutz BJ, Heinicke S, Boucher L, Winter A, Stark C, Nixon J, Ramage L, Kolas N, O'Donnell L, Reguly T, Breitkreutz A, Sellam A, Chen D, Chang C, Rust J, Livstone M, Oughtred R, Dolinski K, Tyers M
Nucleic Acids Res. 2013 Jan;41(Database issue):D816-23.


The BioGRID interaction database: 2015 update.
Chatr-Aryamontri A, Breitkreutz BJ, Oughtred R, Boucher L, Heinicke S, Chen D, Stark C, Breitkreutz A, Kolas N, O'Donnell L, Reguly T, Nixon J, Ramage L, Winter A, Sellam A, Chang C, Hirschman J, Theesfeld C, Rust J, Livstone MS, Dolinski K, Tyers M.
Nucleic Acids Res. 2015 Jan;43(Database issue):D470-8.


Use of the BioGRID Database for Analysis of Yeast Protein and Genetic Interactions.
Oughtred R, Chatr-aryamontri A, Breitkreutz BJ, Chang CS, Rust JM, Theesfeld CL, Heinicke S, Breitkreutz A, Chen D, Hirschman J, Kolas N, Livstone MS, Nixon J, O'Donnell L, Ramage L, Winter A, Reguly T, Sellam A, Stark C, Boucher L, Dolinski K, Tyers M.
Cold Spring Harb Protoc. 2016 Jan 4;2016(1):pdb.prot088880.


BioGRID: A Resource for Studying Biological Interactions in Yeast.
Oughtred R, Chatr-aryamontri A, Breitkreutz BJ, Chang CS, Rust JM, Theesfeld CL, Heinicke S, Breitkreutz A, Chen D, Hirschman J, Kolas N, Livstone MS, Nixon J, O'Donnell L, Ramage L, Winter A, Reguly T, Sellam A, Stark C, Boucher L, Dolinski K, Tyers M.
Cold Spring Harb Protoc. 2016 Jan 4;2016(1):pdb.top080754.


The BioGRID interaction database: 2017 update
Chatr-Aryamontri A, Oughtred R, Boucher L, Rust J, Chang C, Kolas NK, O'Donnell L, Oster S, Theesfeld C, Sellam A, Stark C, Breitkreutz BJ, Dolinski K, Tyers M.
Nucleic Acids Res. 2017 Jan 4;45(D1):D369-D379.

Types of DataProtein-Protein Interactions, Genetic Interaction Networks
Types of ToolsPathway diagram tools
Contents
Genes / Proteins: 66,975
Interactions / Reactions: 1,493,749
Experiments / PubMed IDs: 63,354
Last Content Update: August 1st, 2017
Major OrganismsArabidopsis thaliana, Escherichia coli, Bos taurus, Hepatitis C virus, Rattus norvegicus, Caenorhabditis elegans, Homo sapiens, Saccharomyces cerevisiae, Mus musculus, Schizosaccharomyces pombe, Danio rerio, Oryza sativa, Xenopus laevis, Drosophila melanogaster, Plasmodium falciparum, Human immunodeficiency virus
Relative Popularity747
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"Pathguide: the pathway resource list" is maintained by Gary Bader1.
The website was originally created by Michael Cary 2 and was significantly updated and redesigned by Vuk Pavlovic1.
Thanks to Emek Demir for the Pathguide name.

1. Bader Lab
2. Sander Group

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