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Full Record: TFClass  
Short NameTFClass
Full NameClassification of Human Transcription Factors and Mouse Orthologs
URLhttp://tfclass.bioinf.med.uni-goettingen.de/tfclass
Last ObservedJune 16th, 2017
DescriptionTFClass is a classification of human transcription factors (TFs) and their mouse orthologs based on the characteristics of their DNA-binding domains. It comprises four general levels (superclass, class, family, subfamily) and two levels of instantiation (genus and molecular species). Two of them (subfamily and factor species) are optional. In addition, information on potential binding sites that (a) are located in the 1kb upstream region of human genes, (b) are conserved among human, mouse, dog and cow, and (c) have a minimum threshold as selected are also included.
Sample Data URL 
Data SourceSecondary
AvailabilityFree to all users
PubMed ArticlesTFClass: an expandable hierarchical classification of human transcription factors.
Wingender E, Schoeps T, Donitz J.
Nucleic Acids Res. 2013 Jan;41(Database issue):D165-70.


TFClass: a classification of human transcription factors and their rodent orthologs.
Wingender E, Schoeps T, Haubrock M, Donitz J.
Nucleic Acids Res. 2015 Jan;43(Database issue):D97-102.

Types of DataTranscription Factors / Gene Regulatory Networks
Types of Tools
Contents
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Major OrganismsHomo sapiens, Mus musculus
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"Pathguide: the pathway resource list" is maintained by Gary Bader1.
The website was originally created by Michael Cary 2 and was significantly updated and redesigned by Vuk Pavlovic1.
Thanks to Emek Demir for the Pathguide name.

1. Bader Lab
2. Sander Group

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