Pathguide: the pathway resource list
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Full Record: SIGNOR  
Short NameSIGNOR
Full NameThe SIGnaling Network Open Resource
URLhttp://signor.uniroma2.it/
Last ObservedMay 15th, 2017
DescriptionThe SIGnaling Network Open Resource (SIGNOR) organizes and stores in a structured format signaling information published in the scientific literature. The captured information is stored as binary causative relationships between biological entities and can be represented graphically as activity flow. The entire network can be freely downloaded and used to support logic modeling or to interpret high content datasets. The core of this project is a collection of more than 11000 manually-annotated causal relationships between proteins that participate in signal transduction. Each relationship is linked to the literature reporting the experimental evidence. In addition each node is annotated with the chemical inhibitors that modulate its activity. The signaling information is mapped to the human proteome even if the experimental evidence is based on experiments on mammalian model organisms.
Sample Data URLhttp://signor.uniroma2.it/relation_result.php?id=Q14416
Data SourcePrimary
AvailabilityFree to all users
PubMed ArticlesSIGNOR: a database of causal relationships between biological entities.
Perfetto L, Briganti L, Calderone A, Perpetuini AC, Iannuccelli M, Langone F, Licata L, Marinkovic M, Mattioni A, Pavlidou T, Peluso D, Petrilli LL, Pirro S, Posca D, Santonico E, Silvestri A, Spada F, Castagnoli L, Cesareni G.
Nucleic Acids Res. 2016 Jan 4;44(D1):D548-54.

Types of DataProtein-Protein Interactions, Signaling Pathways, Protein-Compound Interactions
Types of Tools
Contents
Small Molecules: 54
Genes / Proteins: 3,524
Interactions / Reactions: 17,438
Experiments / PubMed IDs: 6,504
Last Content Update: April 5th, 2017
Major OrganismsRattus norvegicus, Homo sapiens, Mus musculus
Relative Popularity
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"Pathguide: the pathway resource list" is maintained by Gary Bader1.
The website was originally created by Michael Cary 2 and was significantly updated and redesigned by Vuk Pavlovic1.
Thanks to Emek Demir for the Pathguide name.

1. Bader Lab
2. Sander Group

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