Pathguide: the pathway resource list
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Full Record: PDBsum  
Short NamePDBsum
Full NamePDBsum: pictorial database of 3D structures in the Protein Data Bank
URLhttp://www.ebi.ac.uk/thornton-srv/databases/cgi-bin/pdbsum/GetPage.pl?pdbcode=in...
Last ObservedFebruary 9th, 2017
DescriptionThe PDBsum is a pictorial database that provides an at-a-glance overview of the contents of each 3D structure deposited in the Protein Data Bank (PDB). It shows the molecule(s) that make up the structure (ie protein chains, DNA, ligands and metal ions) and schematic diagrams of their interactions. Extensive use is made of the freely available RasMol molecular graphics program to view the molecules and their interactions in 3D.
Sample Data URL 
Data SourceSecondary
AvailabilityFree to all users
PubMed ArticlesPDBsum: a Web-based database of summaries and analyses of all PDB structures.
Laskowski RA, Hutchinson EG, Michie AD, Wallace AC, Jones ML, Thornton JM.
Trends Biochem Sci. 1997 Dec;22(12):488-90.


PDBsum: summaries and analyses of PDB structures.
Laskowski RA.
Nucleic Acids Res. 2001 Jan 1;29(1):221-2.


PDBsum more: new summaries and analyses of the known 3D structures of proteins and nucleic acids.
Laskowski RA, Chistyakov VV, Thornton JM.
Nucleic Acids Res. 2005 Jan 1;33(Database issue):D266-8.


PDBsum new things.
Laskowski RA.
Nucleic Acids Res. 2009 Jan;37(Database issue):D355-9.


PDBsum additions.
de Beer TA, Berka K, Thornton JM, Laskowski RA.
Nucleic Acids Res. 2014 Jan;42(Database issue):D292-6.

Types of DataProtein-Protein Interactions, Protein-Compound Interactions
Types of Tools
Contents
Genes / Proteins: 132,087
Last Content Update: August 14th, 2017
Major Organisms
Relative Popularity418
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"Pathguide: the pathway resource list" is maintained by Gary Bader1.
The website was originally created by Michael Cary 2 and was significantly updated and redesigned by Vuk Pavlovic1.
Thanks to Emek Demir for the Pathguide name.

1. Bader Lab
2. Sander Group

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