| T3DB | | Toxin and Toxin-Target Database | | http://www.t3db.ca/ | | March 16th, 2017 | | T3DB compiles comprehensive information about common or ubiquitous toxins and their toxin-targets into a single repository. Each T3DB record (ToxCard) contains over 90 data fields providing detailed information on chemical properties and descriptors, toxicity values, protein and gene sequences (for both targets and toxins), molecular and cellular interaction data, toxicological data, mechanistic information and references. This information has been manually extracted and manually verified from numerous sources, including other electronic databases, government documents, textbooks and scientific journals. | | | | Primary | | Free to all users | T3DB: a comprehensively annotated database of common toxins and their targets.
Lim E, Pon A, Djoumbou Y, Knox C, Shrivastava S, Guo AC, Neveu V, Wishart DS.
Nucleic Acids Res. 2010 Jan;38(Database issue):D781-6.
T3DB: an integrated database for bacterial type III secretion system.
Wang Y, Huang H, Sun M, Zhang Q, Guo D
BMC Bioinformatics. 2012 Apr 30;13:66.
T3DB: the toxic exposome database.
Wishart D, Arndt D, Pon A, Sajed T, Guo AC, Djoumbou Y, Knox C, Wilson M, Liang Y, Grant J, Liu Y, Goldansaz SA, Rappaport SM.
Nucleic Acids Res. 2015 Jan;43(Database issue):D928-34.
| | Protein-Compound Interactions | | Interaction or functional association prediction | | Small Molecules: | 3,673 | | Interactions / Reactions: | 42,471 | | Pathways: | 384 | | Experiments / PubMed IDs: | 18,143 | | Last Content Update: | December 24th, 2014 |
| | | 67 |  |
|
|
