Pathguide: the pathway resource list
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Full Record: STITCH  
Short NameSTITCH
Full NameChemical-Protein Interaction Networks
URLhttp://stitch.embl.de/
Last ObservedMarch 16th, 2017
DescriptionSTITCH is a resource to explore known and predicted interactions of chemicals and proteins. Chemicals are linked to other chemicals and proteins by evidence derived from experiments, databases and the literature.
Sample Data URL 
Data SourceSecondary
AvailabilityFree to all users
PubMed ArticlesSTITCH: interaction networks of chemicals and proteins
Kuhn M, von Mering C, Campillos M, Jensen LJ, Bork P.
Nucleic Acids Res. 2008 Jan;36(Database issue):D684-8.


STITCH 2: an interaction network database for small molecules and proteins
Kuhn M, Szklarczyk D, Franceschini A, Campillos M, von Mering C, Jensen LJ, Beyer A, Bork P.
Nucleic Acids Research, 2010, Vol. 38, Database issue D552-D556


STITCH 3: zooming in on protein-chemical interactions.
Kuhn M, Szklarczyk D, Franceschini A, von Mering C, Jensen LJ, Bork P
Nucleic Acids Res. 2012 Jan;40(Database issue):D876-80.


STITCH 4: integration of protein-chemical interactions with user data.
Kuhn M, Szklarczyk D, Pletscher-Frankild S, Blicher TH, von Mering C, Jensen LJ, Bork P.
Nucleic Acids Res. 2014 Jan;42(Database issue):D401-7.


STITCH 5: augmenting protein-chemical interaction networks with tissue and affinity data.
Szklarczyk D, Santos A, von Mering C, Jensen LJ, Bork P, Kuhn M.
Nucleic Acids Res. 2016 Jan 4;44(D1):D380-4.

Types of DataProtein-Compound Interactions
Types of ToolsInteraction or functional association prediction
Contents
Small Molecules: 500,000
Genes / Proteins: 9,643,763
Interactions / Reactions: 1,600,000,000
Last Content Update: November 20th, 2015
Major Organisms
Relative Popularity241
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"Pathguide: the pathway resource list" is maintained by Gary Bader1.
The website was originally created by Michael Cary 2 and was significantly updated and redesigned by Vuk Pavlovic1.
Thanks to Emek Demir for the Pathguide name.

1. Bader Lab
2. Sander Group

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