Pathguide: the pathway resource list
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Full Record: HDR  
Short NameHDR
Full NameHomeodomain Resource Database
URLhttp://research.nhgri.nih.gov/homeodomain/
Last ObservedMarch 17th, 2017
DescriptionThe Homeodomain Resource is a curated collection of sequence, structure, interaction, genomic, and functional information on the homeodomain family.

This links to a curated list of homeodomain interactions at the protein level, providing information on the mechanism of interaction and links to the primary literature documenting these interactions.

See also this publication: Moreland, R.T., Ryan, J.F., Pan, C. and Baxevanis, A.D. (2009) The Homeodomain Resource: a comprehensive collection of sequence, structure, interaction, genomic, and functional information on the homeodomain protein family. Database (2009) Vol. 2009:bap004; doi:10.1093/database/bap004

Sample Data URL 
Data SourcePrimary
AvailabilityFree to all users
PubMed ArticlesThe Homeodomain Resource: sequences, structures and genomic information.
Banerjee-Basu S, Ferlanti ES, Ryan JF, Baxevanis AD.
Nucleic Acids Res. 1999 Jan 1;27(1):336-7.


The homeodomain resource: a prototype database for a large protein family.
Banerjee-Basu S, Ryan JF, Baxevanis AD
Nucleic Acids Res. 2000 Jan 1;28(1):329-30.


The Homeodomain Resource: sequences, structures, DNA binding sites and genomic information.
Banerjee-Basu S, Sink DW, Baxevanis AD.
Nucleic Acids Res. 2001 Jan 1;29(1):291-3.


The Homeodomain Resource: 2003 update.
Banerjee-Basu S, Moreland T, Hsu BJ, Trout KL, Baxevanis AD.
Nucleic Acids Res. 2003 Jan 1;31(1):304-6


The Homeodomain Resource: a comprehensive collection of sequence, structure, interaction, genomic and functional information on the homeodomain protein family.
Moreland RT, Ryan JF, Pan C, Baxevanis AD
Database (Oxford). 2009;2009:bap004.

Types of DataProtein-Protein Interactions, Protein Sequence Focused
Types of Tools
Contents
Genes / Proteins: 1,623
Interactions / Reactions: 101
Last Content Update: September 29th, 2016
Major OrganismsRattus norvegicus, Homo sapiens, Mus musculus, Danio rerio, Drosophila melanogaster
Relative Popularity27
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"Pathguide: the pathway resource list" is maintained by Gary Bader1.
The website was originally created by Michael Cary 2 and was significantly updated and redesigned by Vuk Pavlovic1.
Thanks to Emek Demir for the Pathguide name.

1. Bader Lab
2. Sander Group

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