| iRefWeb | | Interaction Reference Index Web Interface | | http://wodaklab.org/iRefWeb/ | | February 8th, 2017 | | iRefWeb provides a web-based query interface to a relational database containing the latest build of the interaction Reference Index.
The interaction Reference Index (or iRefIndex) integrates protein interaction data from six different interaction databases: BIND, BioGrid, IntAct, MINT, MPPI, and OPHID.
The iRefWeb interface thus groups together interaction records from the different databases that all support the same protein interaction or complex. It hence enables a non-redundant view of the data and may be used to locate interaction data for a protein of interest regardless of which interaction database(s) contain the information. | | | | Secondary | | Free to all users | iRefIndex: a consolidated protein interaction database with provenance.
Razick S, Magklaras G, Donaldson IM.
BMC Bioinformatics. 2008 Sep 30;9:405
iRefWeb: interactive analysis of consolidated protein interaction data and their supporting evidence.
Turner B, Razick S, Turinsky AL, Vlasblom J, Crowdy EK, Cho E, Morrison K, Donaldson IM, Wodak SJ
Database (Oxford). 2010 Oct 12;2010:baq023.
Literature curation of protein interactions: measuring agreement across major public databases.
Turinsky AL, Razick S, Turner B, Donaldson IM, Wodak SJ.
Database (Oxford). 2010 Dec 22;2010:baq026.
Interaction databases on the same page.
Turinsky AL, Razick S, Turner B, Donaldson IM, Wodak SJ.
Nat Biotechnol. 2011 May;29(5):391-3.
| | Protein-Protein Interactions | | | Genes / Proteins: | 91,645 | | Interactions / Reactions: | 542,927 | | Experiments / PubMed IDs: | 81,472 | | Last Content Update: | June 17th, 2014 |
| | Arabidopsis thaliana, Escherichia coli, Caenorhabditis elegans, Homo sapiens, Saccharomyces cerevisiae, Mus musculus, Schizosaccharomyces pombe, Drosophila melanogaster | | 67 |  |
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