Pathguide: the pathway resource list
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Full Record: RiceCyc  
Short NameRiceCyc
Full NameThe rice metabolic pathway database
URLhttp://pathway.gramene.org/gramene/ricecyc.shtml
Last ObservedFebruary 24th, 2017
DescriptionMetabolic pathways in rice, constructed first by computational transfer of experimentally derived pathways from E. coli and Arabidopsis (from AraCyc and EcoCyc), followed by manual expert curation.
Sample Data URL 
Data SourcePrimary
AvailabilityFree to all users
PubMed ArticlesGramene: a bird's eye view of cereal genomes
Jaiswal P, Ni J, Yap I, Ware D, Spooner W, Youens-Clark K, Ren L, Liang C, Zhao W, Ratnapu K, Faga B, Canaran P, Fogleman M, Hebbard C, Avraham S, Schmidt S, Casstevens TM, Buckler ES, Stein L, McCouch S.
Nucleic Acids Res. 2006 Jan 1;34(Database issue):D717-23.

Types of DataMetabolic Pathways
Types of ToolsPathway diagram tools
Contents
Small Molecules: 1,543
Genes / Proteins: 47,886
Interactions / Reactions: 2,190
Pathways: 308
Last Content Update: November 3rd, 2015
Major OrganismsOryza sativa
Relative Popularity40
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"Pathguide: the pathway resource list" is maintained by Gary Bader1.
The website was originally created by Michael Cary 2 and was significantly updated and redesigned by Vuk Pavlovic1.
Thanks to Emek Demir for the Pathguide name.

1. Bader Lab
2. Sander Group

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