| YEASTRACT | | YEAst Search for Transcriptional Regulators And Consensus Tracking | | http://www.yeastract.com/ | | March 9th, 2017 | | Contains regulatory associations between transcription factors and target genes, based on experimental evidence. Also includes specific DNA binding sites for some transcription factors. | | | | Secondary | | Free to all users | The YEASTRACT database: a tool for the analysis of transcription regulatory associations in Saccharomyces cerevisiae.
Teixeira MC, Monteiro P, Jain P, Tenreiro S, Fernandes AR, Mira NP, Alenquer M, Freitas AT, Oliveira AL, Sa-Correia I.
Nucleic Acids Res. 2006 Jan 1;34(Database issue):D446-51
YEASTRACT-DISCOVERER: new tools to improve the analysis of transcriptional regulatory associations in Saccharomyces cerevisiae.
Monteiro PT, Mendes ND, Teixeira MC, d'Orey S, Tenreiro S, Mira NP, Pais H, Francisco AP, Carvalho AM, Lourenco AB, Sa-Correia I, Oliveira AL, Freitas AT.
Nucleic Acids Res. 2008 Jan;36(Database issue):D132-6
YEASTRACT: providing a programmatic access to curated transcriptional regulatory associations in Saccharomyces cerevisiae through a web services interface.
Abdulrehman D, Monteiro PT, Teixeira MC, Mira NP, Lourenco AB, dos Santos SC, Cabrito TR, Francisco AP, Madeira SC, Aires RS, Oliveira AL, Sa-Correia I, Freitas AT
Nucleic Acids Res. 2011 Jan;39(Database issue):D136-40.
Characterization of complex regulatory networks and identification of promoter regulatory elements in yeast: "in silico" and "wet-lab" approaches.
Mira NP, Teixeira MC, Sa-Correia I.
Methods Mol Biol. 2012;809:27-48.
The YEASTRACT database: an upgraded information system for the analysis of gene and genomic transcription regulation in Saccharomyces cerevisiae.
Teixeira MC, Monteiro PT, Guerreiro JF, Goncalves JP, Mira NP, dos Santos SC, Cabrito TR, Palma M, Costa C, Francisco AP, Madeira SC, Oliveira AL, Freitas AT, Sa-Correia I.
Nucleic Acids Res. 2014 Jan;42(Database issue):D161-6.
Predicting Gene and Genomic Regulation in Saccharomyces cerevisiae, using the YEASTRACT Database: A Step-by-Step Guided Analysis.
Teixeira MC, Monteiro PT, Sa-Correia I.
Methods Mol Biol. 2016;1361:391-404.
| | Transcription Factors / Gene Regulatory Networks | | | Interactions / Reactions: | 163,000 | | Experiments / PubMed IDs: | 1,600 | | Last Content Update: | May 4th, 2017 |
| | Saccharomyces cerevisiae | | 309 |  |
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